Data Dictionary

The resulting statistics file has the following fields.

Column / field / feature	Description	Type	Units
image	Filename (minus extension) of scan.	str	N/A
threshold	Whether grain is above or below a threshold.	str	N/A
molecule_number	Number of found grain (starts at 0)	int	N/A
centre_x	x co-ordinate of grain centre.	float	m
centre_y	y co-ordinate of grain centre.	float	m
radius_min	minimum distance from the centroid to edge of the grain.	float	m
radius_max	maximum distance from the centroid to edge of the grain.	float	m
radius_mean	mean distance from the centroid to the edge of the grain.	float	m
radius_median	median distance from the centroid to the edge of the grain.	float	m
height_min	Minimum height of grain.	float	m
height_max	Maximum height of grain.	float	m
height_median	Median height of grain.	float	m
height_mean	Mean height of grain.	float	m
volume	Volume of the grain calculated as the number of pixels multiplied by each height and scaled to metres.	float	m^3
area	Area of the grain itself calculated as the number of pixels scaled to metres.	float	m^2
area_cartesian_bbox	Area of the bounding box for the grain along the cartesian axes. (Not the smallest bounding box).	float	m^2
smallest_bounding_width	Width of the smallest bounding box for the grain (not along cartesian axes).	float	m
smallest_bounding_length	Length of the smallest bounding box for the grain (not along cartesian axes).	float	m
smallest_bounding_area	Area of the smallest bounding box for the grain (not along cartesian axes).	float	m^2
aspect_ratio	Aspect ratio of the grain (length / width), always >= 1.	float	N/A
max_feret	Longest length of the grain (see Feret diameter).	float	m
min_feret	Shortest width of the grain (see Feret diameter).	float	m
contour_lengths	UNKNOWN	float	m
circular	Whether the grain is a circular loop or not.	float	True / False
end_to_end_distance	UNKNOWN	float	m
basename	Directory in which images was found.	str	N/A