| afmformats |
Python library for reading common AFM file formats |
Paul MΓΌller |
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Python |
MIT |
π§ β β |
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| AutoSmarTrace |
For automated tracing of chains in AFM images or any bright chain-like objects on dark background with or without noise. |
Mathew Schneider, Naghmeh Rezaei, Nancy Forde |
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MatLab |
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| Gwyddion |
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David NeΔas and Petr Klapetek |
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C |
GPL |
π§ β β |
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| nanite |
Fitting and machine-learning based rating of AFM force-indentation data |
Paul MΓΌller |
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Python |
GPL |
π§ β β |
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π |
| NanoLocz |
An interactive AFM image viewer and analysis platform designed for browsing and analysing image data from AFM and HS-AFM imaging with the aim of increasing throughput. |
George Heath, Emily Micklethwaite, Tabitha Storer |
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π |
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Matlab |
GPL-3.0 |
π§ β β |
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π |
| playNano |
Python toolkit for processing and visualising high-speed AFM (Atomic Force Microscopy) video data. |
Daniel E. Rollins |
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π |
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Python |
GPL-3.0 |
π§ β β |
Free |
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| PS Poly |
Polymer image analysis and shape categorization of AFM data |
Elizabeth Conley |
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π |
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Igor Pro, Python |
CC |
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| pyAF |
An AFM Force Curve Analysis Software |
Michka Popoff, Antoine Dujardin, Javier Lopez-Alonso, Simone Bovio, Nuno Duarte, SΓ©bastien Janel, Vincent Dupres, Frank Lafont |
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Python |
CeCILL 2.1 |
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| PyFMLab |
An open-source solution that paves the way for standardized viscoelastic characterization of biological samples from both force-distance curves and micro-rheology measurements. |
Javier LΓ³pez-Alonso, Yogesh Saravanan, Felix Rico |
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Python |
MIT |
β |
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| PyJibe |
GUI for AFM data analysis with an emphasis on biological specimens |
Paul MΓΌller |
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Python |
GPL |
π§ β β |
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| SmarTrace |
Chain tracing program developed to extract persistence lengths from AFM images of filaments such as collagen and DNA. Can be used on any type of image with bright chain-like structures on a darker background. |
Naghmeh Rezaei, Nancy Forde |
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MatLab |
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| TopoStats |
An AFM image analysis program to batch process data by removing artefacts, identifying objects, and obtaining and plotting their statistics. |
TopoStats Developers |
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π |
π |
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Python |
LGPL |
π§ β β |
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| Trace_y |
Tracing filament polymers and individual filament 3D structural analysis algorithms. |
Wei-Feng Xue |
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Matlab |
MIT |
β β |
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